snappy-pipeline
0.2.2
Pipeline Users Docs
Quickstart
Installation
Usage
Overview
Somatic pipeline
Mapping and friends
Panel of normals
Somatic variation filtration
Somatic CNV calling
Export to cBioPortal
Pipeline Step Docs
Pipeline Step Introduction
Generic Pipeline Step Description
Adapter Trimming
Germline Build Target Sequence gCNV Model
Germline Build WGS gCNV Model
HLA Typing
IGV Session Generation
NGS Data QC
NGS Mapping
Somatic Gene Fusion Calling
Somatic Purity & Ploidy Estimate
Somatic Targeted Seq. CNV Calling
Somatic Variant Annotation
Somatic Variant Calling
Somatic Variant Filtration
Somatic WGS CNV Calling
Somatic WGS SV Calling
Germline Targeted Seq. CNV Calling
Germline Targeted Seq. MEI Calling
Germline Repeat Expansion Analysis
Germline Variant Annotation
Germline Variant Calling
Germline Variant Sanity Checking
Germline Variant
De Novo
Filtration
Germline Variant Phasing
Germline Variant Filtration
Germline SV Calling
Germline WGS SV Filtration
Pipeline Developers Docs
Developer’s Introduction
Somatic Variant Calling Dissection
NGS Mapping Dissection
API Documentation
Project Info
Contributing
How To: Release
Credits
Changelog
License
snappy-pipeline
Germline WGS SV Filtration
View page source
Germline WGS SV Filtration